Diversity of haplogroup R1a-Z2122 in subpopulations of balkars and karachays according to microsatellite diversity



Cite item

Full Text

Open Access Open Access
Restricted Access Access granted
Restricted Access Subscription or Fee Access

Abstract

Being one of the most mountainous Turkic peoples in the world, the genetic background of the Karachais and Balkars remains poorly understood. The aim of this study is to comprehensively study the haplogroup R1a-Z2122 of the Y-chromosome in the population of Karachais and in the sub-ethnic groups of Balkars. The material for the study was DNA samples from Karachais (n = 126) and Balkars (n = 235). The analysis of the genetic diversity of the population of Karachais and subpopulations of Balkars living in the central part of the North Caucasus region was carried out according to the data on the distribution of Y-SNP (Single nucleotide polymorphism) hap-logroups and Y-STR (Short tandem repeats) haplotypes. According to the results of genotyping of the R1a-Z2122 haplogroup in the Balkar subpopulations, the R1a-Z2122 haplogroup was detected with a frequency of 3.4%, and in the Karachai population - 2.4%. In the course of studying the distribution of this haplogroup in sub-ethnic groups of Balkars, its high content in the group of Chegemians was shown, where it is 6.8% of the diversity of haplogroups of the Y-chromosome. In the group of Baksans, the frequency of this haplogroup decreases to 4.8%, among Bezengievs it is found in 2.6% of the population, and among Malkars in 1.7%, while this haplogroup was not found in the Kholam population. For the analysis of STR-haplotypes of the Y-chromosome, we selected 11 samples belonging to the haplogroup R1a-Z2122. As a result of the construction of the median network and the circular dendrogram, significant variability was shown within the studied sample. The data obtained by us as a result of the research can be used in the development of courses for students of biological, historical and medical specialties. The created unique collection of DNA samples from Balkars and Karachais can subsequently be used for population, evolutionary, and medico-genetic studies.

Full Text

Restricted Access

About the authors

M. A Dzhaubermezov

Bashkir State University; Institute of Biochemistry and Genetics - Subdivision of the Ufa Federal Research Centre of the RAS

N. V Ekomasova

Bashkir State University; Institute of Biochemistry and Genetics - Subdivision of the Ufa Federal Research Centre of the RAS

S. S Litvinov

Institute of Biochemistry and Genetics - Subdivision of the Ufa Federal Research Centre of the RAS

E. A Tokareva

Bashkir State University

L. R Gabidullina

Bashkir State University

R. R Valiev

Bashkir State University

A. Kh Nurgalieva

Bashkir State University

E. K Khusnutdinova

Bashkir State University; Institute of Biochemistry and Genetics - Subdivision of the Ufa Federal Research Centre of the RAS

References

  1. Федеральная служба государственной статистики, http://www.gks.ru
  2. Bulayeva K., Jorde L., Ostler C. et. al. Genetics and population history of Caucasus populations. Hum. Biol. 2003; 75(6): 837-53.
  3. Roostalu U., Kutuev I., Loogvali E.-L. et. al. Origin and Expansion of Haplogroup H., the Dominant Human Mitochondrial DNA Lineage in West Eurasia: the Near Eastern and Caucasian Perspective. Mol. Biol. Evol. 2007; 24(2): 436-48.
  4. Yunusbayev B., Metspalu M., Jarve M. et al. The Caucasus as an asymmetric semipermeable barrier to ancient human migrations. Mol. Biol. Evol. 2012; 29(1): 359-65.
  5. Khusnutdinova E.K., Litvinov S.S., Kutuev I.A. et al. Gene pool of ethnic groups of the Caucasus: Results of integrated study of the Y. chromosome and mitochondrial DNA and genome-wide data. Rus. J. Genetics 2012; 48(6): 640-50.
  6. Схаляхо Р.А. Тюрки Кавказа: сравнительный анализ генофондов по данным о Y-хромосоме. Вестник Московского университета. Серия XXIII. Антропология 2013; 2: 34-48.
  7. FamilyTree DNA, www.familytreedna.com.
  8. Karafet T.M., Mendez F.L., Meilerman M.B. et. al. New binary polymorphisms reshape and increase resolution of the human Y. chromosomal haplogroup tree. Genome Res. 2008; 18 (5): 830-8.
  9. Кутуев И.А., Хуснутдинова Э.К. Генетическая структура и молекулярная филогеография народов Евразии. Уфа: Гилем; 2011.
  10. Rootsi S., Behar D.M., Jarve M. et al. Phylogenetic applications of whole Y-chromosome sequences and the Near Eastern origin of Ashkenazi Levites. Nat. Commun. 2013; 4: 2928.
  11. Walsh B. Estimating the time to the most recent common ancestor for the Y. chromosome or mitochondrial DNA for a pair of individuals. Genetics 2001; 158(2): 897-912.
  12. Tracking Back. A website for genetic genealogy tools, experimentation, and discussion, http://scaledinnovation.com/gg/gg.html.

Supplementary files

Supplementary Files
Action
1. JATS XML

Copyright (c) 2021 Eco-Vector



СМИ зарегистрировано Федеральной службой по надзору в сфере связи, информационных технологий и массовых коммуникаций (Роскомнадзор).
Регистрационный номер и дата принятия решения о регистрации СМИ: 

This website uses cookies

You consent to our cookies if you continue to use our website.

About Cookies